MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Mammaliicoccus sciuri
ACT.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 62
bases: 2,736,455 bps
CDS: 2,710
rRNA: 9
Repeat region:
tmRNA: 1
tRNA: 59
misc RNA:
Total features: 2,779
Total number of protein coding genes annotated/found:
2,710
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Items 21 - 40
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Molecule
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5014|JADGMB010000029.1
SEQF5014_01302
Genome Viewer
NA
AA
303/101
20759-20457
hypothetical protein
SEQF5014|JADGMB010000029.1
SEQF5014_01303
Genome Viewer
NA
AA
270/90
20907-21176
Acylphosphatase
SEQF5014|JADGMB010000029.1
SEQF5014_01304
Genome Viewer
NA
AA
714/238
21192-21905
hypothetical protein
SEQF5014|JADGMB010000029.1
SEQF5014_01305
Genome Viewer
NA
AA
1203/401
21898-23100
TelA-like protein
SEQF5014|JADGMB010000029.1
SEQF5014_01306
Genome Viewer
NA
AA
1203/401
24591-23389
hypothetical protein
SEQF5014|JADGMB010000029.1
SEQF5014_01307
Genome Viewer
NA
AA
1338/446
26016-24679
Branched-chain amino acid transport system 2 carrier protein
SEQF5014|JADGMB010000029.1
SEQF5014_01308
Genome Viewer
NA
AA
1887/629
28018-26132
hypothetical protein
SEQF5014|JADGMB010000029.1
SEQF5014_01309
Genome Viewer
NA
AA
798/266
28826-28029
Denitrification regulatory protein NirQ
SEQF5014|JADGMB010000029.1
SEQF5014_01310
Genome Viewer
NA
AA
204/68
29108-28905
hypothetical protein
SEQF5014|JADGMB010000029.1
SEQF5014_01311
Genome Viewer
NA
AA
816/272
29939-29124
Putative ring-cleaving dioxygenase MhqA
SEQF5014|JADGMB010000029.1
SEQF5014_01312
Genome Viewer
NA
AA
825/275
31042-30218
2-succinyl-6-hydroxy-2%2C4-cyclohexadiene-1-carboxylate synthase
SEQF5014|JADGMB010000029.1
SEQF5014_01313
Genome Viewer
NA
AA
1263/421
32521-31259
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex
SEQF5014|JADGMB010000029.1
SEQF5014_01314
Genome Viewer
NA
AA
2787/929
35321-32535
2-oxoglutarate dehydrogenase E1 component
SEQF5014|JADGMB010000029.1
SEQF5014_01315
Genome Viewer
NA
AA
1377/459
36789-35413
Signal transduction histidine-protein kinase ArlS
SEQF5014|JADGMB010000029.1
SEQF5014_01316
Genome Viewer
NA
AA
675/225
37460-36786
Response regulator ArlR
SEQF5014|JADGMB010000029.1
SEQF5014_01317
Genome Viewer
NA
AA
609/203
38717-38109
hypothetical protein
SEQF5014|JADGMB010000029.1
SEQF5014_01318
Genome Viewer
NA
AA
1068/356
39798-38731
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase
SEQF5014|JADGMB010000029.1
SEQF5014_01319
Genome Viewer
NA
AA
516/172
40316-39801
hypothetical protein
SEQF5014|JADGMB010000029.1
SEQF5014_01320
Genome Viewer
NA
AA
1428/476
41759-40332
putative CtpA-like serine protease
SEQF5014|JADGMB010000029.1
SEQF5014_01321
Genome Viewer
NA
AA
222/74
42500-42279
hypothetical protein
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Items 21 - 40
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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